Last updated: 2025-05-25 21648 annotations 43 curated publications
Gene: cwf23 / SJAG_02560
Gene symbol
cwf23
Product
DNAJ domain protein Cwf23
Feature type
protein coding
Systematic ID
SJAG_02560
Product size
292 aa, 34.68 kDa
Genomic location
I, 981960-981082 (879nt) coding start to stop
981960-981082 (879nt) including UTRs
Structure view loading ...
Protein domains and features
Protein families and domains
Match ID Source Name InterPro ID Start End Count
PF00226 Pfam DnaJ domain IPR001623
9
71
cd12429 CDD DNAJC17, RNA recognition motif IPR034254
172
247
cd06257 CDD DnaJ domain IPR001623
9
63
PS00636 PROSITE_PATTERNS DnaJ domain, conserved site IPR018253
51
70
PS50076 PROSITE_PROFILES DnaJ domain IPR001623
9
74
SM00271 SMART DnaJ domain IPR001623
8
66
PR00625 PRINTS DnaJ domain IPR001623
11
66
SSF46565 SUPERFAMILY Chaperone J-domain superfamily IPR036869
5
74
G3DSA:1.10.287.110 Gene3D Chaperone J-domain superfamily IPR036869
4
100
G3DSA:3.30.70.330 Gene3D Nucleotide-binding alpha-beta plait domain superfamily IPR012677
165
259
PTHR44313 PANTHER Pre-mRNA-splicing and ERAD-associated protein IPR052094
5
291
Coil COILS Coil
95
120
115
143
mobidb-lite-Disorder MOBIDB-Disorder disorder_prediction
248
276
mobidb-lite-Polar MOBIDB-Polar disorder_prediction
261
274
mobidb-lite-Polyampholyte MOBIDB-Polyampholyte disorder_prediction
249
260
Domain organization at InterPro ...
No predicted trans-membrane domains
Protein properties
Molecular weight 34.68 kDa
Number of residues 292
Average residue weight 118 Da
Charge at pH 7 8.7
Isoelectric point 9.81
Orthologs
Manually assigned orthologs
Ortholog species Ortholog gene Ortholog description Reference
Homo sapiens DNAJC17 (HGNC:25556) DnaJ heat shock protein family (Hsp40) member C17 Lock A et al. (2018)
Schizosaccharomyces pombe cwf23 (SPCC10H11.02) DNAJ domain protein Cwf23 Rhind N et al. (2011)
Saccharomyces cerevisiae CWC23 (YGL128C) Component of a complex containing Cef1p more ... Lock A et al. (2018)
Ortholog prediction resources
Ensembl Fungal Compara SJAG_02560 Alignments, gene trees, orthologs, families
Ensembl Pan-taxonomic Compara SJAG_02560 Gene tree, orthologs
Transcript details
Key:
 
UTR
 
exon
mRNA SJAG_02560.1
DNAJ domain protein Cwf23
Location: 981960-981082 (879nt), chromosome I reverse strand     Product size: 292 aa, 34.68 kDa
 
Sequence
>SJAG_02560.1 length:292
MPVIDANFDVYEILGIQEDAEEKDIHRAWRKTSLKYHPDKNPNDPTAIEKFHKLQVAYNLLIDPATRREYDTERLARQAQKRREEAFDLKRKSMVDDLKAREQKAFQEIDEKERAQLARLEKLRRLREENEQLRHEYLQKHARATTGSGEKRDRTEFEMNNVPPKTLDDIDRTVKVRWKQKYNEFMSKEELLRILEPFGPVQALIVRELDINKKFSTAYVVFERLSSAYASVHAETVPKYVKDIQWARQKNEHGSNKDKTMNTTGEKSQPSDFSKLSFEEQTLFRLKQKKRA*
External references
GO annotation QuickGO B6K0K4 QuickGO Gene Ontology annotation viewer
GO annotation AmiGO SJAG_02560 GO Consortium browser
Interactions STRING B6K0K4 Network display of known and predicted interactions and functional associations
Sequence Resources UniProtKB/SwissProt B6K0K4 Protein database
Sequence Resources NCBI cwf23 Query all NCBI databases
Sequence Resources Ensembl SJAG_02560 Genome browser
Orthologs Ensembl Fungal Compara SJAG_02560 Alignments, gene trees, orthologs, families
Orthologs Ensembl Pan-taxonomic Compara SJAG_02560 Gene tree, orthologs
Literature
Sort by: Publication gene count | Authors | Year: Ascending / Descending
Details Genes
PomBase: The Scientific Resource for Fission Yeast.
Lock A et al. Methods Mol Biol 2018;1757:49-68 PMID:29761456 details ...
4165
Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6 PMID:21511999 details ...
4284